Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904038.1_cds_XP_016454172.1_48224
CDS Infomation

[gene=LOC107778431] [db_xref=GeneID:107778431] [protein=1-aminocyclopropane-1-carboxylate synthase-like] [protein_id=XP_016454172.1] [location=complement(join(40183..41182,41951..42111,42463..42594,42988..43155))] [gbkey=CDS]
Sequence

ATGGGTTTCATTTCAGGCAATAAGAAACTCCTTTCAAAGATAGCAACAAGTGATGGACAT
GGCGAAAACTCAGCATATTTTGATGGTTGGAAAGCTTATGAAAATGATCCTTTTCATCTA
ACACAAAATCCTAATGGTGTTATTCAGATGGGTTTGGCTGAAAATCAGCTTTGTTTTGAT
TTAATTCAAGAATGGGTAGTCAATAACCCAAACGCCTCCATTTGCACAGCTGAAGGAGCT
CAAGATTTCAAGGATATTGCTATTTTTCAAGACTATCATGGCTTGCCAGAGTTTAGAAAG
GCAGTTTCAAGATTTATGGAAAAAGTGAGAGGAGATAGAGTTATATTTGATTCAGATCGC
ATTGTTATGAGTGGAGGGGCAACTGGAGCTCATGAAACTCTAGCATTTTGTTTGGCTGAT
CCTGGTGATGCATTTTTAGTTCCTACACCGTATTACCCAGGATTTGATAGAGATTTGAGG
TGGAGAACTGGGGTACAACTTTTTCCTGTTGTTTGTGAGAGTTCCAACAATTTCAAGGTC
ACAAAAGAAGCCTTAGAATCTGCATATGAAAAAGCTCAAGAATCAAATATCAGAGTAAAA
GGCTTACTTATAAACAATCCATCAAATCCATTAGGCACAGTCCTAGACAGGGAAACATTA
AAAGACATACTAAGATTCATCAATGACAAAAACATCCACTTAGTATGCGACGAAATCTAC
GCTGCAACGGTCTTTAGCCAGCCCGATTTCATCAGTATATCCGAAGTAATGCAGGAAGTT
AATGGTTGCAACGAAAATTTGGTACATGTTGTTTATAGCCTGTCGAAAGATTTGGGATTT
CCTGGATTCAGAGTCGGGATTATTTACTCATACAACGACGTAGTGGTGAATTGTGCTAGA
AAAATGTCAAGTTTTGGACTCGTTTCAACACAAACGCAATTCTTGATTGCTTCCATGTTA
TCGGATGAGATTTTCGTTGAAAATTTCATCGCGAAGAGCTCAGTGAGATTGTCACAAAGG
CATGGTTTGTTCACTAAGGGATTAGCACAAGTTGGAATTAGTACATTGAAGAGTAATGGT
GGCTTATTTTTTTGGATGGATTTGAGAAGACTACTTAAAGAGTCAACATTTGAAGCTGAA
TTGGATCTTTGGCATATAATTATTAATGAAGTTAAACTCAATGTTTCTCCTGGTGTTTCA
TTTCATTGTTCTGAGCCTGGTTGGTTTAGAGTATGTTTTGCTAATATGGATGATGAAACT
ATGAGAGTTGCATTGAGAAGAATTAGGCATTTTGTGCTACAAAGAAAGGGACTAATTGAA
GTTGCAACCAAGAAACAATGTAGAAGGAGCAAACTTGAAATTAGTTTATCATTTAGAAGA
TTGGATGATTTCATGAATTCTCCTTTCAAGAACTCTCCTCACTCTCCAATGTCTTCTCCT
ATGGTCCAAGCGAGGACTTAA

Peptide Sequence

PEP ID

XP_016454172.1
PEP Infomation

PREDICTED: 1-aminocyclopropane-1-carboxylate synthase-like [Nicotiana tabacum]
Sequence

MGFISGNKKLLSKIATSDGHGENSAYFDGWKAYENDPFHLTQNPNGVIQMGLAENQLCFD
LIQEWVVNNPNASICTAEGAQDFKDIAIFQDYHGLPEFRKAVSRFMEKVRGDRVIFDSDR
IVMSGGATGAHETLAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLFPVVCESSNNFKV
TKEALESAYEKAQESNIRVKGLLINNPSNPLGTVLDRETLKDILRFINDKNIHLVCDEIY
AATVFSQPDFISISEVMQEVNGCNENLVHVVYSLSKDLGFPGFRVGIIYSYNDVVVNCAR
KMSSFGLVSTQTQFLIASMLSDEIFVENFIAKSSVRLSQRHGLFTKGLAQVGISTLKSNG
GLFFWMDLRRLLKESTFEAELDLWHIIINEVKLNVSPGVSFHCSEPGWFRVCFANMDDET
MRVALRRIRHFVLQRKGLIEVATKKQCRRSKLEISLSFRRLDDFMNSPFKNSPHSPMSSP
MVQART

Transcript Sequence

Gene sequence data has not been registered.